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gnu: Add r-airway.
* gnu/packages/bioconductor.scm (r-airway): New variable. Change-Id: I521c1bf868566f80997c8ba80609fd5709a95694
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@ -2019,6 +2019,37 @@ of modifications to @dfn{oxidized cysteine} (Cys) 34 in @dfn{human serum
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albumin} (HSA).")
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albumin} (HSA).")
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(license license:artistic2.0)))
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(license license:artistic2.0)))
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(define-public r-airway
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(package
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(name "r-airway")
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(version "1.26.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "airway" version
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'experiment))
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(sha256
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(base32 "0cj8s2pxydq7n644lf07vb9g89gqbd91s3m0d0x1qvbp1sskp536"))))
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(properties `((upstream-name . "airway")))
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(build-system r-build-system)
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(propagated-inputs (list r-summarizedexperiment))
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(native-inputs (list r-knitr))
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(home-page "https://bioconductor.org/packages/airway")
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(synopsis
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"RangedSummarizedExperiment for RNA-Seq in airway smooth muscle cells")
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(description
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"This package provides a @code{RangedSummarizedExperiment} object of read
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counts in genes for an RNA-Seq experiment on four human airway smooth muscle
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cell lines treated with dexamethasone. Details on the gene model and read
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counting procedure are provided in the package vignette. The citation for the
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experiment is: Himes BE, Jiang X, Wagner P, Hu R, Wang Q, Klanderman B,
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Whitaker RM, Duan Q, Lasky-Su J, Nikolos C, Jester W, Johnson M, Panettieri R
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Jr, Tantisira KG, Weiss ST, Lu Q. RNA-Seq Transcriptome Profiling Identifies
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CRISPLD2 as a Glucocorticoid Responsive Gene that Modulates Cytokine Function
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in Airway Smooth Muscle Cells. P@code{LoS} One. 2014 Jun 13;9(6):e99625.
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PMID: 24926665. GEO: GSE52778.")
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(license license:lgpl2.0+)))
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(define-public r-aneufinderdata
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(define-public r-aneufinderdata
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(package
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(package
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(name "r-aneufinderdata")
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(name "r-aneufinderdata")
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