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Merge remote-tracking branch 'origin/master' into core-updates

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Efraim Flashner 2017-11-01 10:29:59 +02:00
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gnu/packages/python.scm
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@ -15,7 +15,7 @@
;;; Copyright © 2015, 2017 Ben Woodcroft <donttrustben@gmail.com>
;;; Copyright © 2015, 2016 Erik Edrosa <erik.edrosa@gmail.com>
;;; Copyright © 2015, 2016, 2017 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2015 Kyle Meyer <kyle@kyleam.com>
;;; Copyright © 2015, 2017 Kyle Meyer <kyle@kyleam.com>
;;; Copyright © 2015, 2016 Chris Marusich <cmmarusich@gmail.com>
;;; Copyright © 2016 Danny Milosavljevic <dannym+a@scratchpost.org>
;;; Copyright © 2016 Lukas Gradl <lgradl@openmailbox.org>
@ -1098,6 +1098,119 @@ etc.). The package is structured to make adding new modules easy.")
"python"
(package-inputs pycrypto)))))))
(define-public python-humanfriendly
(package
(name "python-humanfriendly")
(version "4.4.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "humanfriendly" version))
(sha256
(base32
"0pisgizjql86785jchfjv217g0lsgk114g2lja5j4y3lsc3b9szi"))))
(build-system python-build-system)
(arguments
`(;; XXX: Tests depend on coloredlogs, which in turn depends on humanfriendly.
#:tests? #f))
(propagated-inputs
`(("python-monotonic" ,python-monotonic)))
(home-page "https://humanfriendly.readthedocs.io")
(synopsis "Human-friendly input and output in Python")
(description
"The functions and classes in @code{humanfriendly} can be used to make
text interfaces more user-friendly. It includes tools to parse and format
numbers, file sizes, and timespans, timers for long-running operations, menus
to allow the user to choose from a list of options, and terminal interaction
helpers.")
(license license:expat)))
(define-public python2-humanfriendly
(package-with-python2 python-humanfriendly))
(define-public python-capturer
(package
(name "python-capturer")
(version "2.4")
(source
(origin
(method url-fetch)
(uri (pypi-uri "capturer" version))
(sha256
(base32
"05d6ji4j8ipiq0br7bwam38qc6hd9l1djmfxlzrxx19ziyjl4089"))))
(build-system python-build-system)
(arguments
`(#:tests? #f))
(propagated-inputs
`(("python-humanfriendly" ,python-humanfriendly)))
(home-page "https://capturer.readthedocs.io")
(synopsis "Capture stdout and stderr streams of the current process")
(description
"The capturer package makes it easy to capture the stdout and stderr
streams of the current process and subprocesses. Output can be relayed
to the terminal in real time but is also available to the Python program
for additional processing.")
(license license:expat)))
(define-public python2-capturer
(package-with-python2 python-capturer))
(define-public python-verboselogs
(package
(name "python-verboselogs")
(version "1.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "verboselogs" version))
(sha256
(base32
"09z4d1jiasn7k1hs5af2ckmnrd0i1d1m04bhfjhv7z6svzfdwgg3"))))
(build-system python-build-system)
(native-inputs
`(("python-mock" ,python-mock)
("python-astroid" ,python-astroid)
("python-pylint" ,python-pylint)))
(home-page "https://verboselogs.readthedocs.io")
(synopsis "Verbose logging level for Python's logging module")
(description
"The @code{verboselogs} package extends Python's @code{logging} module to
add the log levels NOTICE, SPAM, SUCCESS and VERBOSE.")
(license license:expat)))
(define-public python2-verboselogs
(package-with-python2 python-verboselogs))
(define-public python-coloredlogs
(package
(name "python-coloredlogs")
(version "7.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "coloredlogs" version))
(sha256
(base32
"1blcann6dyg5dhps9pg12rn0q0rjrlajpmmil0gy0j4cbvnl2il9"))))
(build-system python-build-system)
(arguments
`(;Tests require some updated modules
#:tests? #f))
(propagated-inputs
`(("python-capturer" ,python-capturer)))
(home-page "https://coloredlogs.readthedocs.io")
(synopsis "Colored stream handler for Python's logging module")
(description
"The @code{coloredlogs} package enables colored terminal output for
Python's logging module. The @code{ColoredFormatter} class inherits from
@code{logging.Formatter} and uses ANSI escape sequences to render your logging
messages in color.")
(license license:expat)))
(define-public python2-coloredlogs
(package-with-python2 python-coloredlogs))
(define-public python-eventlet
(package
(name "python-eventlet")
@ -6524,13 +6637,13 @@ of the structure, dynamics, and functions of complex networks.")
(define-public snakemake
(package
(name "snakemake")
(version "3.13.3")
(version "4.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "snakemake" version))
(sha256
(base32 "1nixb944r4hlskwkzc4wjs34b40xpxpw9gmhhm5p09gvmm22ap5d"))))
(base32 "0mgl44q152ws40zj2vicqark5szyd73vqy9pf26g6hk6dk0y0c79"))))
(build-system python-build-system)
(arguments
;; TODO: Package missing test dependencies.
@ -6549,7 +6662,11 @@ of the structure, dynamics, and functions of complex networks.")
#t)))))
(propagated-inputs
`(("python-wrapt" ,python-wrapt)
("python-requests" ,python-requests)))
("python-requests" ,python-requests)
("python-appdirs" ,python-appdirs)
("python-configargparse" ,python-configargparse)
("python-pyyaml" ,python-pyyaml)
("python-ratelimiter" ,python-ratelimiter)))
(home-page "https://bitbucket.org/snakemake/snakemake/wiki/Home")
(synopsis "Python-based execution environment for make-like workflows")
(description
@ -9186,20 +9303,30 @@ config files.")
(define-public python-configargparse
(package
(name "python-configargparse")
(version "0.10.0")
(version "0.12.0")
(source (origin
(method url-fetch)
(uri (string-append
"https://pypi.python.org/packages/source/C/ConfigArgParse/"
"https://pypi.io/packages/source/C/ConfigArgParse/"
"ConfigArgParse-" version ".tar.gz"))
(sha256
(base32
"19wh919gbdbzxzpagg52q3lm62yicm95ddlcx77dyjc1slyshl1v"))))
"0fgkiqh6r3rbkdq3k8c48m85g52k96686rw3a6jg4lcncrkpvk98"))))
(build-system python-build-system)
(native-inputs
`(("python-pyyaml" ,python-pyyaml)))
(arguments
;; FIXME: Bug in test suite filed upstream:
;; https://github.com/bw2/ConfigArgParse/issues/32
'(#:tests? #f))
`(#:phases
(modify-phases %standard-phases
(replace 'check
(lambda _
;; Bypass setuptools-shim because one test relies on "setup.py"
;; being the first argument passed to the python call.
;;
;; NOTE: Many tests do not run because they rely on Python's
;; built-in test.test_argparse, but we remove the unit tests from
;; our Python installation.
(zero? (system* "python" "setup.py" "test")))))))
(synopsis "Replacement for argparse")
(description "A drop-in replacement for argparse that allows options to also
be set via config files and/or environment variables.")
@ -16740,3 +16867,27 @@ interpreter when it prints a stack trace.")
(define-public python2-traceback2
(package-with-python2 python-traceback2))
(define-public python-ratelimiter
(package
(name "python-ratelimiter")
(version "1.2.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "ratelimiter" version))
(sha256
(base32
"1dhz85mj5bqd2mij84ncs6pz32hgidr79hay4aqfmzaa4rbb497p"))))
(build-system python-build-system)
(arguments
'(#:tests? #f)) ; There are no tests in the pypi archive.
(home-page "https://github.com/RazerM/ratelimiter")
(synopsis "Simple rate limiting object")
(description
"The @code{ratelimiter} module ensures that an operation will not be
executed more than a given number of times during a given period.")
(license license:asl2.0)))
(define-public python2-ratelimiter
(package-with-python2 python-ratelimiter))