mirror/guix
mirror/guix
1
Fork 0
mirror of https://https.git.savannah.gnu.org/git/guix.git/ synced 2025-07-15 11:30:44 +02:00
Code Releases Activity

gnu: r-batchelor: Add missing inputs.

Browse source 
* gnu/packages/bioconductor.scm (r-batchelor)[native-inputs]: Add r-bluster
and r-scran.
[arguments]: Add phase 'delete-bad-tests.

Change-Id: Id23065c7b4b8209ddd058e1a68a88b2142df1bd1
This commit is contained in:
Ricardo Wurmus 2024-11-26 16:40:24 +01:00
parent d8336a0cff
commit 3f33e65e28
No known key found for this signature in database
GPG key ID: 197A5888235FACAC
1 changed files with 11 additions and 1 deletions
Download patch file Download diff file Expand all files Collapse all files

12
gnu/packages/bioconductor.scm
View file

@ -15770,6 +15770,16 @@ multiplication and calculation of row/column sums or means.")
"0l63w2c2jl27rj47604lx80wlppsp7h1panbm0n89fvf4vbzgm22"))))
(properties `((upstream-name . "batchelor")))
(build-system r-build-system)
(arguments
(list
#:phases
'(modify-phases %standard-phases
(add-after 'unpack 'delete-bad-tests
(lambda _
;; Two tests fail with: Objects equal but not identical
(for-each delete-file
'("tests/testthat/test-correct-exps.R"
"tests/testthat/test-reduced-mnn.R")))))))
(propagated-inputs
(list r-beachmat
r-biocgenerics
@ -15788,7 +15798,7 @@ multiplication and calculation of row/column sums or means.")
r-singlecellexperiment
r-sparsearray
r-summarizedexperiment))
(native-inputs (list r-knitr r-testthat))
(native-inputs (list r-bluster r-knitr r-scran r-testthat))
(home-page "https://bioconductor.org/packages/batchelor")
(synopsis "Single-Cell Batch Correction Methods")
(description