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gnu: r-systempiper: Add missing inputs and disable tests.

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* gnu/packages/bioconductor.scm (r-systempiper)[native-inputs]: Add
r-systempiperdata.
[arguments]: Disable tests.

Change-Id: Ic071bbcb53ef9fb96385fbbdb5725ed2a4490db7
This commit is contained in:
Ricardo Wurmus 2024-11-26 11:47:42 +01:00
parent 877c366285
commit 5460c2aed8
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GPG key ID: 197A5888235FACAC
1 changed files with 3 additions and 1 deletions
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4
gnu/packages/bioconductor.scm
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@ -13012,6 +13012,8 @@ unmodeled, or latent sources of noise.")
"1f27vb03x1vmhi9nmizfzrvkyczhgrsgmc5fcf5xnyfmmhs97cnr")))) "1f27vb03x1vmhi9nmizfzrvkyczhgrsgmc5fcf5xnyfmmhs97cnr"))))
(properties `((upstream-name . "systemPipeR"))) (properties `((upstream-name . "systemPipeR")))
(build-system r-build-system) (build-system r-build-system)
;; Tests fail because genWorkenvir fails to set up the environment.
(arguments (list #:tests? #false))
(propagated-inputs (propagated-inputs
(list r-biocgenerics (list r-biocgenerics
r-biostrings r-biostrings
@ -13027,7 +13029,7 @@ unmodeled, or latent sources of noise.")
r-summarizedexperiment r-summarizedexperiment
r-yaml)) r-yaml))
(native-inputs (native-inputs
(list r-knitr r-testthat)) (list r-knitr r-systempiperdata r-testthat))
(home-page "https://github.com/tgirke/systemPipeR") (home-page "https://github.com/tgirke/systemPipeR")
(synopsis "Next generation sequencing workflow and reporting environment") (synopsis "Next generation sequencing workflow and reporting environment")
(description (description