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gnu: r-sgseq: Add missing inputs.

* gnu/packages/bioconductor.scm (r-sgseq)[native-inputs]: Add
r-bsgenome-hsapiens-ucsc-hg19.
[arguments]: Add phase 'delete-bad-tests.

Change-Id: I5ff9e2af754700e5ba70ad7bdd1be5ec952946a3
This commit is contained in:
Ricardo Wurmus 2024-11-26 11:43:29 +01:00
parent af70af3529
commit 7cc00303ec
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@ -18967,6 +18967,14 @@ alignment tool.")
"1xchrzd384wzm81vzrcixyzn3mgnd343cp544yvfzfn2vxr4y1ij"))))
(properties `((upstream-name . "SGSeq")))
(build-system r-build-system)
(arguments
(list
#:phases
'(modify-phases %standard-phases
(add-after 'unpack 'delete-bad-tests
(lambda _
;; This test attempts to download a data file.
(delete-file "inst/unitTests/test_predictVariantEffects.R"))))))
(propagated-inputs
(list r-annotationdbi
r-biocgenerics
@ -18983,7 +18991,7 @@ alignment tool.")
r-s4vectors
r-summarizedexperiment))
(native-inputs
(list r-knitr r-runit))
(list r-bsgenome-hsapiens-ucsc-hg19 r-knitr r-runit))
(home-page "https://bioconductor.org/packages/SGSeq/")
(synopsis "Splice event prediction and quantification from RNA-seq data")
(description