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gnu: r-sgseq: Add missing inputs.
* gnu/packages/bioconductor.scm (r-sgseq)[native-inputs]: Add r-bsgenome-hsapiens-ucsc-hg19. [arguments]: Add phase 'delete-bad-tests. Change-Id: I5ff9e2af754700e5ba70ad7bdd1be5ec952946a3
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1 changed files with 9 additions and 1 deletions
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@ -18967,6 +18967,14 @@ alignment tool.")
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"1xchrzd384wzm81vzrcixyzn3mgnd343cp544yvfzfn2vxr4y1ij"))))
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"1xchrzd384wzm81vzrcixyzn3mgnd343cp544yvfzfn2vxr4y1ij"))))
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(properties `((upstream-name . "SGSeq")))
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(properties `((upstream-name . "SGSeq")))
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(build-system r-build-system)
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(build-system r-build-system)
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(arguments
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(list
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#:phases
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'(modify-phases %standard-phases
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(add-after 'unpack 'delete-bad-tests
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(lambda _
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;; This test attempts to download a data file.
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(delete-file "inst/unitTests/test_predictVariantEffects.R"))))))
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(propagated-inputs
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(propagated-inputs
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(list r-annotationdbi
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(list r-annotationdbi
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r-biocgenerics
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r-biocgenerics
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@ -18983,7 +18991,7 @@ alignment tool.")
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r-s4vectors
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r-s4vectors
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r-summarizedexperiment))
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r-summarizedexperiment))
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(native-inputs
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(native-inputs
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(list r-knitr r-runit))
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(list r-bsgenome-hsapiens-ucsc-hg19 r-knitr r-runit))
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(home-page "https://bioconductor.org/packages/SGSeq/")
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(home-page "https://bioconductor.org/packages/SGSeq/")
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(synopsis "Splice event prediction and quantification from RNA-seq data")
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(synopsis "Splice event prediction and quantification from RNA-seq data")
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(description
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(description
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