mirror of
https://https.git.savannah.gnu.org/git/guix.git/
synced 2025-07-16 12:00:35 +02:00
gnu: Simplify package inputs.
This commit was obtained by running: ./pre-inst-env guix style without any additional argument.
This commit is contained in:
parent
aca2defe01
commit
8394619bac
460 changed files with 37644 additions and 49727 deletions
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@ -75,20 +75,17 @@
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(base32 "0rh5b1rwdcvvagld8vpxnpaibszy1skpx39a0fwzd5gx5pwcjvfb"))))
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(build-system python-build-system)
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(propagated-inputs
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`(("python-numpy" ,python-numpy)
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("python-matplotlib" ,python-matplotlib)
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("python-pyparsing" ,python-pyparsing)))
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(list python-numpy python-matplotlib python-pyparsing))
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(inputs
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`(("openblas" ,openblas)
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("pybind11" ,pybind11)))
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(list openblas pybind11))
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(native-inputs
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`(("python-cython" ,python-cython)
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("python-pytest" ,python-pytest)
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("python-sphinx" ,python-sphinx)
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("python-numpydoc" ,python-numpydoc)
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("gfortran" ,gfortran)
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("perl" ,perl)
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("which" ,which)))
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(list python-cython
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python-pytest
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python-sphinx
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python-numpydoc
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gfortran
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perl
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which))
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(outputs '("out" "doc"))
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(arguments
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`(#:phases
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@ -188,14 +185,14 @@ routines such as routines for numerical integration and optimization.")
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(base32
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"1cgvgin8fvckv96hjh3ikmwkra5rif51bdb75ifzf7xbil5iwcx4"))))
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(native-inputs
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`(("python-cython" ,python2-cython)
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("python-pytest" ,python2-pytest)
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("python-sphinx" ,python2-sphinx)
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("python-numpydoc" ,python2-numpydoc)
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("gfortran" ,gfortran-7)
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("gcc" ,gcc-7)
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("perl" ,perl)
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("which" ,which)))))
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(list python2-cython
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python2-pytest
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python2-sphinx
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python2-numpydoc
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gfortran-7
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gcc-7
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perl
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which))))
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(define-public python2-weave
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(package
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@ -218,9 +215,9 @@ routines such as routines for numerical integration and optimization.")
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"--exclude"
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"test_(user|incorrect_ownership|char_fail|obj_fail)"))))))
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(propagated-inputs
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`(("python-numpy" ,python2-numpy)))
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(list python2-numpy))
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(native-inputs
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`(("python-nose" ,python2-nose)))
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(list python2-nose))
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(home-page "https://www.scipy.org/")
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(synopsis "Tools for including C/C++ code within Python code")
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(description "Weave is the stand-alone version of the obsolete Scipy
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@ -249,11 +246,9 @@ Cython.")
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(invoke "nosetests" "-s" "-v" "skfuzzy")
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#t)))))
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(native-inputs
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`(("python-nose" ,python-nose)))
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(list python-nose))
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(propagated-inputs
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`(("python-networkx" ,python-networkx)
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("python-numpy" ,python-numpy)
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("python-scipy" ,python-scipy)))
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(list python-networkx python-numpy python-scipy))
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(home-page "https://github.com/scikit-fuzzy/scikit-fuzzy")
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(synopsis "Fuzzy logic toolkit for SciPy")
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(description
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@ -293,24 +288,24 @@ logic, also known as grey logic.")
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;; NOTE: scikit-image has an optional dependency on python-pooch, however
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;; propagating it would enable many more tests that require online data.
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(propagated-inputs
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`(("python-cloudpickle" ,python-cloudpickle)
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("python-dask" ,python-dask)
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("python-imageio" ,python-imageio)
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("python-matplotlib" ,python-matplotlib)
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("python-networkx" ,python-networkx)
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("python-numpy" ,python-numpy)
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("python-pillow" ,python-pillow)
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("python-pywavelets" ,python-pywavelets)
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("python-scipy" ,python-scipy)
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("python-tifffile" ,python-tifffile)))
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(list python-cloudpickle
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python-dask
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python-imageio
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python-matplotlib
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python-networkx
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python-numpy
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python-pillow
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python-pywavelets
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python-scipy
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python-tifffile))
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(native-inputs
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`(("python-codecov" ,python-codecov)
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("python-cython" ,python-cython)
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("python-flake8" ,python-flake8)
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("python-pytest" ,python-pytest)
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("python-pytest-cov" ,python-pytest-cov)
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("python-pytest-localserver" ,python-pytest-localserver)
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("python-wheel" ,python-wheel)))
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(list python-codecov
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python-cython
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python-flake8
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python-pytest
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python-pytest-cov
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python-pytest-localserver
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python-wheel))
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(home-page "https://scikit-image.org/")
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(synopsis "Image processing in Python")
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(description
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@ -329,7 +324,7 @@ logic, also known as grey logic.")
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(base32 "0dncp9i5b6afkg7f8mj9j0qzsp008b8v73yc0qkmizhpns7mvwvx"))))
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(build-system python-build-system)
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(propagated-inputs
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`(("python-numpy" ,python-numpy)))
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(list python-numpy))
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(home-page "https://github.com/brandon-rhodes/python-sgp4")
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(synopsis "Track earth satellite TLE orbits using SGP4")
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(description
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@ -394,26 +389,24 @@ of the SGP4 satellite tracking algorithm.")
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" and not TestS3"
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" and not s3"))))))))))
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(propagated-inputs
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`(("python-jinja2" ,python-jinja2)
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("python-numpy" ,python-numpy)
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("python-openpyxl" ,python-openpyxl)
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("python-pytz" ,python-pytz)
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("python-dateutil" ,python-dateutil)
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("python-xlrd" ,python-xlrd)))
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(list python-jinja2
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python-numpy
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python-openpyxl
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python-pytz
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python-dateutil
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python-xlrd))
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(inputs
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`(("which" ,which)
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("xclip" ,xclip)
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("xsel" ,xsel)))
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(list which xclip xsel))
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(native-inputs
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`(("python-cython" ,python-cython)
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("python-beautifulsoup4" ,python-beautifulsoup4)
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("python-lxml" ,python-lxml)
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("python-html5lib" ,python-html5lib)
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("python-nose" ,python-nose)
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("python-pytest" ,python-pytest)
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("python-pytest-mock" ,python-pytest-mock)
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;; Needed to test clipboard support.
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("xorg-server" ,xorg-server-for-tests)))
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(list python-cython
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python-beautifulsoup4
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python-lxml
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python-html5lib
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python-nose
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python-pytest
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python-pytest-mock
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;; Needed to test clipboard support.
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xorg-server-for-tests))
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(home-page "https://pandas.pydata.org")
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(synopsis "Data structures for data analysis, time series, and statistics")
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(description
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@ -508,21 +501,18 @@ doing practical, real world data analysis in Python.")
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;; XXX: Due to the deleted tests above.
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"not test_read_s3_jsonl"))))))))
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(propagated-inputs
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`(("python-numpy" ,python2-numpy)
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("python-openpyxl" ,python2-openpyxl)
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("python-pytz" ,python2-pytz)
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("python-dateutil" ,python2-dateutil)
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("python-xlrd" ,python2-xlrd)))
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(list python2-numpy python2-openpyxl python2-pytz python2-dateutil
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python2-xlrd))
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(inputs
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`(("which" ,which)))
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(list which))
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(native-inputs
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`(("python-cython" ,python2-cython)
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("python-beautifulsoup4" ,python2-beautifulsoup4)
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("python-lxml" ,python2-lxml)
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("python-html5lib" ,python2-html5lib)
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("python-nose" ,python2-nose)
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("python-pytest" ,python2-pytest)
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("python-pytest-mock" ,python2-pytest-mock))))))
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(list python2-cython
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python2-beautifulsoup4
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python2-lxml
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python2-html5lib
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python2-nose
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python2-pytest
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python2-pytest-mock)))))
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(define-public python-pyflow
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(package
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@ -563,11 +553,9 @@ context of a task dependency graph. It has some similarities to make.")
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(lambda _
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(invoke "python" "setup.py" "pytest"))))))
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(native-inputs
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`(("python-hypothesis" ,python-hypothesis)
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("python-pytest" ,python-pytest)
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("python-pytest-runner" ,python-pytest-runner)))
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(list python-hypothesis python-pytest python-pytest-runner))
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(propagated-inputs
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`(("python-numpy" ,python-numpy)))
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(list python-numpy))
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(home-page "https://github.com/pydata/bottleneck")
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(synopsis "Fast NumPy array functions written in C")
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(description
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@ -587,9 +575,7 @@ written in C.")
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(base32 "1c1354a7b3g8slychjgyjxqdm8z40z9kviyl9n4g9kfpdg0p4d64"))))
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(build-system python-build-system)
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(propagated-inputs
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`(("python-matplotlib" ,python-matplotlib)
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("python-numpy" ,python-numpy)
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("python-scipy" ,python-scipy)))
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(list python-matplotlib python-numpy python-scipy))
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(home-page "https://github.com/janezd/baycomp")
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(synopsis "Library for comparison of Bayesian classifiers")
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(description
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@ -613,11 +599,9 @@ higher scores.")
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"1yx8j66b7rn10m2l6gmn8yr9cn38pi5cj0x0wwpy4hdnhy6i7qv4"))))
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(build-system python-build-system)
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(native-inputs
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`(("python-setuptools-scm" ,python-setuptools-scm)
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("python-pytest" ,python-pytest)))
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(list python-setuptools-scm python-pytest))
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(propagated-inputs
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`(("python-numpy" ,python-numpy)
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("python-pandas" ,python-pandas)))
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(list python-numpy python-pandas))
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(arguments
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`(#:phases
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(modify-phases %standard-phases
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|
@ -649,8 +633,7 @@ and visualization with these data structures.")
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"0syzy645mwcy7lfjwz6pc8f9p2vv1qk4limc8iina3l5nnf0rjyz"))))
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(build-system python-build-system)
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(propagated-inputs
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`(("python-msgpack" ,python-msgpack)
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("python-numpy" ,python-numpy)))
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(list python-msgpack python-numpy))
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(home-page "https://github.com/lebedov/msgpack-numpy")
|
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(synopsis
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"Numpy data serialization using msgpack")
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|
@ -684,7 +667,7 @@ Python's native complex data types is also supported.")
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(with-directory-excursion "ruffus/test"
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(invoke "bash" "run_all_unit_tests3.cmd"))))))))
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(native-inputs
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`(("python-pytest" ,python-pytest)))
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(list python-pytest))
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(home-page "http://www.ruffus.org.uk")
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(synopsis "Light-weight computational pipeline management")
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(description
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|
@ -705,11 +688,8 @@ automated with the minimum of fuss and the least effort.")
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"1f8c2sylzr7lpjbyqxsqlp9xi8rj3d8c9hfh98x4jbb83zxc4026"))))
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(build-system python-build-system)
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(propagated-inputs
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`(("python-numpy" ,python-numpy)
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("python-seaborn" ,python-seaborn)
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("python-matplotlib" ,python-matplotlib)
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("python-pandas" ,python-pandas)
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("python-scipy" ,python-scipy)))
|
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(list python-numpy python-seaborn python-matplotlib python-pandas
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python-scipy))
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(home-page
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"https://github.com/webermarcolivier/statannot")
|
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(synopsis "Add annotations to existing plots generated by seaborn")
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|
@ -742,11 +722,9 @@ annotations on an existing boxplots and barplots generated by seaborn.")
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(add-installed-pythonpath inputs outputs)
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(invoke "pytest" "-v" "--doctest-modules"))))))
|
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(propagated-inputs
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`(("python-matplotlib" ,python-matplotlib)
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("python-pandas" ,python-pandas)))
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(list python-matplotlib python-pandas))
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(native-inputs
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`(("python-pytest-runner" ,python-pytest-runner)
|
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("python-pytest-cov" ,python-pytest-cov)))
|
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(list python-pytest-runner python-pytest-cov))
|
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(home-page "https://upsetplot.readthedocs.io")
|
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(synopsis "Draw UpSet plots with Pandas and Matplotlib")
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(description
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|
@ -790,7 +768,7 @@ readable.")
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("pkgconfig" ,python-pkgconfig)
|
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("matplotlib" ,python-matplotlib)))
|
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(native-inputs ; for python-pkgconfig
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`(("pkg-config" ,pkg-config)))
|
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(list pkg-config))
|
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(propagated-inputs
|
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`(("numpy" ,python-numpy)
|
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("vtk" ,vtk)))
|
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|
@ -826,8 +804,7 @@ dependencies.")
|
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"12g4av8gpl6l83yza3h97j3f2jblqv69frlidrvdq8ny2rc6awbq"))))
|
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(build-system python-build-system)
|
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(propagated-inputs
|
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`(("python-pandas" ,python-pandas)
|
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("python-xarray" ,python-xarray)))
|
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(list python-pandas python-xarray))
|
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(home-page "https://github.com/Zsailer/pandas_flavor")
|
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(synopsis "Write your own flavor of Pandas")
|
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(description "Pandas 0.23 added a simple API for registering accessors
|
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|
@ -874,19 +851,18 @@ of Pandas
|
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(when tests?
|
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(invoke "pytest")))))))
|
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(native-inputs
|
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`(("python-pytest" ,python-pytest)
|
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("python-pytest-cov" ,python-pytest-cov)))
|
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(list python-pytest python-pytest-cov))
|
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(propagated-inputs
|
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`(("python-matplotlib" ,python-matplotlib)
|
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("python-mpmath" ,python-mpmath)
|
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("python-numpy" ,python-numpy)
|
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("python-pandas" ,python-pandas)
|
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("python-pandas-flavor" ,python-pandas-flavor)
|
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("python-scikit-learn" ,python-scikit-learn)
|
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("python-scipy" ,python-scipy)
|
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("python-seaborn" ,python-seaborn)
|
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("python-statsmodels" ,python-statsmodels)
|
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("python-tabulate" ,python-tabulate)))
|
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(list python-matplotlib
|
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python-mpmath
|
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python-numpy
|
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python-pandas
|
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python-pandas-flavor
|
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python-scikit-learn
|
||||
python-scipy
|
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python-seaborn
|
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python-statsmodels
|
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python-tabulate))
|
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(home-page "https://pingouin-stats.org/")
|
||||
(synopsis "Statistical package for Python")
|
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(description "Pingouin is a statistical package written in Python 3 and
|
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|
@ -964,21 +940,21 @@ and more
|
|||
;; "AttributeError: module 'distributed.dashboard' has no attribute 'scheduler'"
|
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" and not test_get_client_functions_spawn_clusters"))))))))
|
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(propagated-inputs
|
||||
`(("python-click" ,python-click)
|
||||
("python-cloudpickle" ,python-cloudpickle)
|
||||
("python-cryptography" ,python-cryptography)
|
||||
("python-dask" ,python-dask)
|
||||
("python-msgpack" ,python-msgpack)
|
||||
("python-psutil" ,python-psutil)
|
||||
("python-pyyaml" ,python-pyyaml)
|
||||
("python-setuptools" ,python-setuptools)
|
||||
("python-sortedcontainers" ,python-sortedcontainers)
|
||||
("python-tblib" ,python-tblib)
|
||||
("python-toolz" ,python-toolz)
|
||||
("python-tornado" ,python-tornado-6)
|
||||
("python-zict" ,python-zict)))
|
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(list python-click
|
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python-cloudpickle
|
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python-cryptography
|
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python-dask
|
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python-msgpack
|
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python-psutil
|
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python-pyyaml
|
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python-setuptools
|
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python-sortedcontainers
|
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python-tblib
|
||||
python-toolz
|
||||
python-tornado-6
|
||||
python-zict))
|
||||
(native-inputs
|
||||
`(("python-pytest" ,python-pytest)))
|
||||
(list python-pytest))
|
||||
(home-page "https://distributed.dask.org")
|
||||
(synopsis "Distributed scheduler for Dask")
|
||||
(description "Dask.distributed is a lightweight library for distributed
|
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|
@ -1018,31 +994,31 @@ computing in Python. It extends both the @code{concurrent.futures} and
|
|||
(invoke "python" "-m" "pytest"
|
||||
"modin/pandas/test/test_concat.py")))))))
|
||||
(propagated-inputs
|
||||
`(("python-cloudpickle" ,python-cloudpickle)
|
||||
("python-dask" ,python-dask)
|
||||
("python-distributed" ,python-distributed)
|
||||
("python-numpy" ,python-numpy)
|
||||
("python-packaging" ,python-packaging)
|
||||
("python-pandas" ,python-pandas)))
|
||||
(list python-cloudpickle
|
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python-dask
|
||||
python-distributed
|
||||
python-numpy
|
||||
python-packaging
|
||||
python-pandas))
|
||||
(native-inputs
|
||||
`(("python-coverage" ,python-coverage)
|
||||
("python-jinja2" ,python-jinja2)
|
||||
("python-lxml" ,python-lxml)
|
||||
("python-matplotlib" ,python-matplotlib)
|
||||
("python-msgpack" ,python-msgpack)
|
||||
("python-openpyxl" ,python-openpyxl)
|
||||
("python-psutil" ,python-psutil)
|
||||
("python-pyarrow" ,python-pyarrow)
|
||||
("python-pytest" ,python-pytest)
|
||||
("python-pytest-benchmark" ,python-pytest-benchmark)
|
||||
("python-pytest-cov" ,python-pytest-cov)
|
||||
("python-pytest-xdist" ,python-pytest-xdist)
|
||||
("python-scipy" ,python-scipy)
|
||||
("python-sqlalchemy" ,python-sqlalchemy)
|
||||
("python-tables" ,python-tables)
|
||||
("python-tqdm" ,python-tqdm)
|
||||
("python-xarray" ,python-xarray)
|
||||
("python-xlrd" ,python-xlrd)))
|
||||
(list python-coverage
|
||||
python-jinja2
|
||||
python-lxml
|
||||
python-matplotlib
|
||||
python-msgpack
|
||||
python-openpyxl
|
||||
python-psutil
|
||||
python-pyarrow
|
||||
python-pytest
|
||||
python-pytest-benchmark
|
||||
python-pytest-cov
|
||||
python-pytest-xdist
|
||||
python-scipy
|
||||
python-sqlalchemy
|
||||
python-tables
|
||||
python-tqdm
|
||||
python-xarray
|
||||
python-xlrd))
|
||||
(home-page "https://github.com/modin-project/modin")
|
||||
(synopsis "Make your pandas code run faster")
|
||||
(description
|
||||
|
|
Loading…
Add table
Add a link
Reference in a new issue