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Author SHA1 Message Date
Ricardo Wurmus
17c34fe73d
gnu: r-mlr3learners: Update to 0.11.0.
* gnu/packages/cran.scm (r-mlr3learners): Update to 0.11.0.

Change-Id: I1f701d3f4ce5408507945e569619c388ab0ffc24
2025-05-18 11:37:06 +02:00
Ricardo Wurmus
4ed7b5c07e
gnu: r-mlr3tuningspaces: Update to 0.6.0.
* gnu/packages/cran.scm (r-mlr3tuningspaces): Update to 0.6.0.
[propagated-inputs]: Add r-cli.

Change-Id: I64d45df45647b6d56361f04cb00b1555a7ca68e4
2025-05-18 11:37:06 +02:00
Ricardo Wurmus
cd8f98ff44
gnu: r-doby: Update to 4.6.27.
* gnu/packages/cran.scm (r-doby): Update to 4.6.27.

Change-Id: I2a37f689bc68efecbee5de3d45a54ad1f1315b7d
2025-05-18 11:37:06 +02:00
Ricardo Wurmus
4db94b5fcd
gnu: r-extremes: Update to 2.2-1.
* gnu/packages/cran.scm (r-extremes): Update to 2.2-1.

Change-Id: I27ff2b7b048a74feabdb1041a4f2f11d43edfbd2
2025-05-18 11:37:06 +02:00
Ricardo Wurmus
ba6ec80924
gnu: r-rmumps: Update to 5.2.1-35.
* gnu/packages/cran.scm (r-rmumps): Update to 5.2.1-35.

Change-Id: I5d2deaac2a4772f6d160b9ff3fe880fad0ca60f0
2025-05-18 11:37:06 +02:00
Ricardo Wurmus
59017da22f
gnu: r-ctrdata: Update to 1.22.2.
* gnu/packages/cran.scm (r-ctrdata): Update to 1.22.2.

Change-Id: Ied0b69e65c5dd4dd94389295ea49b7a722955d7c
2025-05-18 11:37:05 +02:00
Ricardo Wurmus
b93b05de6b
gnu: r-ggprism: Update to 1.0.6.
* gnu/packages/cran.scm (r-ggprism): Update to 1.0.6.
[native-inputs]: Add r-tinytest.

Change-Id: Id231b014d958fd45fee60171ff595db0104868d4
2025-05-18 11:37:05 +02:00
Ricardo Wurmus
780649b410
gnu: r-highs: Update to 1.10.0-2.
* gnu/packages/cran.scm (r-highs): Update to 1.10.0-2.
[properties]: Record updater-ignored-native-inputs.
[native-inputs]: Remove gfortran.
[arguments]: Remove.

Change-Id: Ia2fb7ce7961266d21a784925ecd64efe93534b69
2025-05-18 11:37:05 +02:00
Ricardo Wurmus
1835d55872
gnu: r-ggpointdensity: Update to 0.2.0.
* gnu/packages/cran.scm (r-ggpointdensity): Update to 0.2.0.
[native-inputs]: Add r-testthat.

Change-Id: I64c3a61c27b63f5fcaf6002d3b8b4d87c1022a2e
2025-05-18 11:37:05 +02:00
Ricardo Wurmus
fa1ae0b0bb
gnu: r-spatstat-utils: Update to 3.1-4.
* gnu/packages/cran.scm (r-spatstat-utils): Update to 3.1-4.

Change-Id: I4ad751a58e96929e69c5e5b936f3082387ef0c54
2025-05-18 11:37:05 +02:00
Ricardo Wurmus
c850277d73
gnu: r-rsconnect: Update to 1.4.0.
* gnu/packages/cran.scm (r-rsconnect): Update to 1.4.0.
[propagated-inputs]: Add r-jose and r-rcpptoml.

Change-Id: Ia19bc220ce215c04a9e0675149e405f146451e59
2025-05-18 11:37:05 +02:00
Ricardo Wurmus
790e292e6d
gnu: r-lim: Update to 1.4.7.2.
* gnu/packages/cran.scm (r-lim): Update to 1.4.7.2.

Change-Id: Iea43b67cc351d9f19b52f050056e43eba703a49d
2025-05-18 11:37:05 +02:00
Ricardo Wurmus
6f65436f72
gnu: r-xgboost: Update to 1.7.11.1.
* gnu/packages/cran.scm (r-xgboost): Update to 1.7.11.1.

Change-Id: I007ba1e7908daf2456bd0aedeffaf2c152074803
2025-05-18 11:37:05 +02:00
Ricardo Wurmus
7a2ac9de62
gnu: r-sf: Update to 1.0-21.
* gnu/packages/cran.scm (r-sf): Update to 1.0-21.

Change-Id: Ic1102ac173ba282893b24da0ad1e3736b0d45614
2025-05-18 11:37:05 +02:00
Ricardo Wurmus
2500dd481b
gnu: r-precrec: Update to 0.14.5.
* gnu/packages/cran.scm (r-precrec): Update to 0.14.5.
[native-inputs]: Add r-vdiffr.

Change-Id: I355d0aa78aef125d15297d455bf813a6c0df9db9
2025-05-18 11:37:05 +02:00
Ricardo Wurmus
6405b6cafd
gnu: r-limsolve: Update to 1.5.7.2.
* gnu/packages/cran.scm (r-limsolve): Update to 1.5.7.2.

Change-Id: I3f1f35d6e693a7b142fb6c4d7ce5664f29e28b6b
2025-05-18 11:37:04 +02:00
Ricardo Wurmus
75e2d6a8db
gnu: r-hmm: Update to 1.0.2.
* gnu/packages/cran.scm (r-hmm): Update to 1.0.2.

Change-Id: Ia379da8eabec0a6f40209a19fcfb89c56fe7a634
2025-05-18 11:37:04 +02:00
Ricardo Wurmus
b2c5687f14
gnu: Add r-jose.
* gnu/packages/cran.scm (r-jose): New variable.

Change-Id: Idadeb9f7bd3e080b6a4a674b6213f2486c522308
2025-05-18 11:37:04 +02:00
Kyle Andrews
ff50f88935
gnu: Add r-gpg.
* gnu/packages/cran.scm (r-gpg): New variable.

Change-Id: Ic432345101387e4cd2bd6558e0e43f06c4c6b33d
2025-05-15 11:10:42 +02:00
Tor-björn Claesson
d1a5056095
gnu: Add r-bigd.
* gnu/packages/cran.scm (r-bigd): New variable.

Change-Id: I164034f9823f383628fec5361e6ebeff460c43ec
2025-05-15 10:34:23 +02:00
Ricardo Wurmus
d748e4dda7
gnu: r-rmpfr: Update to 1.1-0.
* gnu/packages/cran.scm (r-rmpfr): Update to 1.1-0.

Change-Id: Ica69c58287d4be0d35b24d47ca40aa37aa82aca0
2025-05-15 10:28:02 +02:00
Ricardo Wurmus
1057155993
gnu: r-zip: Update to 2.3.3.
* gnu/packages/cran.scm (r-zip): Update to 2.3.3.

Change-Id: Ia896cd56d6ee7c5fd9b390d4169f554f1899e71a
2025-05-15 10:28:02 +02:00
Ricardo Wurmus
b8c1cde50a
gnu: r-msigdbr: Update to 24.1.0.
* gnu/packages/cran.scm (r-msigdbr): Update to 24.1.0.
[arguments]: Disable some tests.
[propagated-inputs]: Add r-curl.

Change-Id: I90c3c0bf9c9842b13e7b95030b6bfec6b5d71099
2025-05-15 10:28:02 +02:00
Sergey Trofimov
380282f3f5
gnu: packages: Fix broken descriptions.
A few description mistakenly use @{foo} instead of @code{foo} which
results in broken formatting in guix search.

* gnu/packages/bioinformatics.scm (umi-tools),
* gnu/packages/cran.scm (r-ggside),
* gnu/packages/crates-apple.scm: (rust-commoncrypto-0.2),
* gnu/packages/crates-io.scm: (rust-ndarray-rand-0.15),
* gnu/packages/emacs-xyz.scm (emacs-load-relative, emacs-el-x)
(emacs-helm-org-ql, emacs-consult-lsp),
* gnu/packages/golang-xyz.scm (go-github-com-songmu-gitconfig),
* gnu/packages/haskell-xyz.scm (ghc-text-short, ghc-validation),
* gnu/packages/image.scm (imgp),
* gnu/packages/perl-check.scm (perl-test-file-contents),
* gnu/packages/perl-web.scm (perl-uri-db),
* gnu/packages/perl.scm (perl-clipboard, perl-module-refresh),
* gnu/packages/python-xyz.scm (python-ddlparse, python-black-macchiato)
(python-pysendfile),
* gnu/packages/qt.scm (qt5compat),
* gnu/packages/ruby.scm (ruby-ruby-engine, ruby-httpclient),
* gnu/packages/sagemath.scm (python-memory-allocator),
* gnu/packages/spreadsheet.scm (sc-im),
* gnu/packages/time.scm (python-pendulum):
[description]: Fix malformed macros.

Change-Id: I3ed755a54aecf40bf0c5c982f9e70b7cd3689de7
Signed-off-by: Greg Hogan <code@greghogan.com>
2025-05-13 16:35:45 +00:00
Ricardo Wurmus
ee4f2236e0
gnu: Add r-bigstatsr.
* gnu/packages/cran.scm (r-bigstatsr): New variable.

Change-Id: I5e4bc7f9f6567c7cf93cc12bb3d33b46c00646aa
2025-05-13 17:01:01 +02:00
Ricardo Wurmus
9e948013cd
gnu: Add r-bigparallelr.
* gnu/packages/cran.scm (r-bigparallelr): New variable.

Change-Id: I3667c9ae8dce38b8501e8427da96091be0ce7162
2025-05-13 17:01:01 +02:00
Ricardo Wurmus
c43835f485
gnu: Add r-bigreadr.
* gnu/packages/cran.scm (r-bigreadr): New variable.

Change-Id: Ie59f4a1fbc469febedcd584cacac3ddd8d094c26
2025-05-13 17:01:01 +02:00
Ricardo Wurmus
5fde1bc527
gnu: Add r-psychometric.
* gnu/packages/cran.scm (r-psychometric): New variable.

Change-Id: Ifcca90bd90a4f7b8207692e01b535621e548a87e
2025-05-13 17:01:01 +02:00
Ricardo Wurmus
6e8b3fd238
gnu: Add r-multilevel.
* gnu/packages/cran.scm (r-multilevel): New variable.

Change-Id: I28a9ac6ae1498ea703eff45ae56855cab7de9bb6
2025-05-13 17:01:01 +02:00
Ricardo Wurmus
e2b41eb747
gnu: Add r-rmio.
* gnu/packages/cran.scm (r-rmio): New variable.

Change-Id: I6d43d59449d2d483d13fed0cdd14df2effb5e46d
2025-05-13 17:01:01 +02:00
Ricardo Wurmus
1e2eecfa4b
gnu: Add r-bigassertr.
* gnu/packages/cran.scm (r-bigassertr): New variable.

Change-Id: I07b591f4025da1233a915f747054943188a2158c
2025-05-13 17:01:01 +02:00
Ricardo Wurmus
04270c718f
gnu: r-mlr3misc: Update to 0.17.0.
* gnu/packages/cran.scm (r-mlr3misc): Update to 0.17.0.
[propagated-inputs]: Add r-cli.

Change-Id: I38e2e8c7c4d3cd65b127c356f135dc1dad3fc1c9
2025-05-13 14:50:17 +02:00
Ricardo Wurmus
7a067167cd
gnu: r-softimpute: Update to 1.4-3.
* gnu/packages/cran.scm (r-softimpute): Update to 1.4-3.

Change-Id: I4b718844ffa382222f418696705ad316e09a8cb9
2025-05-13 14:50:17 +02:00
Ricardo Wurmus
45beaab565
gnu: r-svglite: Update to 2.2.1.
* gnu/packages/cran.scm (r-svglite): Update to 2.2.1.

Change-Id: I6c4f6cf94cefb0839aa97f401574cc71b156ea77
2025-05-13 14:50:17 +02:00
Ricardo Wurmus
a43f5aac03
gnu: r-data-table: Update to 1.17.2.
* gnu/packages/cran.scm (r-data-table): Update to 1.17.2.

Change-Id: I587b5fbbe6cc5e78711f6cc883cbec5b4b9054e8
2025-05-13 14:50:16 +02:00
Ricardo Wurmus
8cbf771e0a
gnu: r-s2: Update to 1.1.8.
* gnu/packages/cran.scm (r-s2): Update to 1.1.8.
[properties]: Record updater-extra-inputs and updater-ignored-native-inputs;
remove updater-extra-native-inputs.
[inputs]: Addd abseil-cpp.
[native-inputs]: Add r-geos.

Change-Id: If251e8c086dfa6d26bc1ca879d2d5a9adcd7a298
2025-05-13 14:50:12 +02:00
Ricardo Wurmus
afe535fba5
gnu: r-mockr: Update to 0.2.2.
* gnu/packages/cran.scm (r-mockr): Update to 0.2.2.

Change-Id: I90d156fc3caf0f9079bd38666c71007ee975ab5f
2025-05-13 14:50:11 +02:00
Ricardo Wurmus
193afb4148
gnu: r-textshaping: Update to 1.0.1.
* gnu/packages/cran.scm (r-textshaping): Update to 1.0.1.

Change-Id: I7e46cff319bda66c446254981c1252783ca4fcce
2025-05-13 14:50:11 +02:00
Ricardo Wurmus
67e1266a4e
gnu: r-maxstat: Update to 0.7-26.
* gnu/packages/cran.scm (r-maxstat): Update to 0.7-26.

Change-Id: I1c51c7727a52167b15a6578f1b97801e05c8f01a
2025-05-13 14:50:11 +02:00
Ricardo Wurmus
a75f461e17
gnu: r-spatstat-univar: Update to 3.1-3.
* gnu/packages/cran.scm (r-spatstat-univar): Update to 3.1-3.

Change-Id: Ie4f2493b2f7993ab6f16845ebb641b63b3c919e8
2025-05-13 14:50:11 +02:00
Ricardo Wurmus
35e9b9f15e
gnu: r-rpf: Update to 1.0.15.
* gnu/packages/cran.scm (r-rpf): Update to 1.0.15.
[native-inputs]: Add r-ggplot2 and r-reshape2.

Change-Id: Ibfb3137d407b3c3984b5932c685af67802c4c20a
2025-05-13 14:50:10 +02:00
Ricardo Wurmus
72c587712d
gnu: r-archetypes: Update to 2.2-0.2.
* gnu/packages/cran.scm (r-archetypes): Update to 2.2-0.2.

Change-Id: I7db9b9cb6c59a55cd133623af753f8aee6f8cde5
2025-05-13 14:50:10 +02:00
Ricardo Wurmus
221c469c87
gnu: r-gdina: Update to 2.9.9.
* gnu/packages/cran.scm (r-gdina): Update to 2.9.9.

Change-Id: Ia08f2e678a6c17baa235d1fae9bc7f6907392189
2025-05-13 14:50:10 +02:00
Ricardo Wurmus
03e6424c84
gnu: r-txtplot: Update to 1.0-5.
* gnu/packages/cran.scm (r-txtplot): Update to 1.0-5.
[propagated-inputs]: Add r-matrix.

Change-Id: I62681e007c5d80beb0d67cad97b3747ec167be43
2025-05-13 14:50:10 +02:00
Ricardo Wurmus
d3e09ae753
gnu: r-terra: Update to 1.8-50.
* gnu/packages/cran.scm (r-terra): Update to 1.8-50.
[inputs]: Add netcdf.

Change-Id: If9e78e2f3a8cb758634b6d15251b82e709b23680
2025-05-13 14:50:10 +02:00
Ricardo Wurmus
66fe30f151
gnu: r-systemfonts: Update to 1.2.3.
* gnu/packages/cran.scm (r-systemfonts): Update to 1.2.3.
[propagated-inputs]: Add r-base64enc.

Change-Id: I0aa6483d17b24e755321f256b2de1e81d300fd6e
2025-05-13 14:50:10 +02:00
Ricardo Wurmus
a74d1ffa3c
gnu: r-sctransform: Update to 0.4.2.
* gnu/packages/cran.scm (r-sctransform): Update to 0.4.2.

Change-Id: Iebeeafe17e1941de827e26674b29277ff1f0816c
2025-05-13 14:50:09 +02:00
Ricardo Wurmus
5c7e1df56d
gnu: r-arrow: Update to 20.0.0.
* gnu/packages/cran.scm (r-arrow): Update to 20.0.0.

Change-Id: I7164eea8e8f8193742188bf2d9cd04e6b53d5b14
2025-05-13 14:50:09 +02:00
Ricardo Wurmus
be8ba920be
gnu: r-future: Update to 1.49.0.
* gnu/packages/cran.scm (r-future): Update to 1.49.0.

Change-Id: I6ff70800c1ed292e02410db5d4fb3e75b4e326cc
2025-05-13 14:50:09 +02:00
Ricardo Wurmus
0bc96404eb
gnu: r-parallelly: Update to 1.44.0.
* gnu/packages/cran.scm (r-parallelly): Update to 1.44.0.

Change-Id: Iabbe2aa392e45e67f29ace68780cda12655f5a66
2025-05-13 14:50:09 +02:00