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gnu: checkm: Use pyproject-build-system.

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* gnu/packages/bioinformatics.scm (checkm): Run guix style.
[build-system]: Use pyproject.
[native-inputs]: Add python-setuptools and python-wheel.

Change-Id: I7d3214c29a7e2b3a6065336632f534a2c4cefbbc
Signed-off-by: Sharlatan Hellseher <sharlatanus@gmail.com>
This commit is contained in:
Kjartan Oli Agustsson 2025-06-18 00:24:01 +00:00 • committed by Sharlatan Hellseher
parent 20ee2f57bc
commit aeb5fd0a24
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1 changed files with 10 additions and 12 deletions
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gnu/packages/bioinformatics.scm
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@ -21637,19 +21637,17 @@ sequence for paired-ended data, for which this information is not available.")
(method url-fetch)
(uri (pypi-uri "checkm-genome" version))
(sha256
(base32
"0i2nnki639hgjag17wlva2x0ymn37b4krqsf6akxddykhfbkdnkz"))))
(build-system python-build-system)
(base32 "0i2nnki639hgjag17wlva2x0ymn37b4krqsf6akxddykhfbkdnkz"))))
(build-system pyproject-build-system)
(arguments
`(#:tests? #f ; Some tests fail for unknown reasons.
#:phases
(modify-phases %standard-phases
(add-before 'check 'set-HOME
(lambda _
(setenv "HOME" "/tmp"))))))
(inputs
(list python-dendropy python-matplotlib python-numpy python-pysam
python-scipy))
`(#:tests? #f ;Some tests fail for unknown reasons.
#:phases (modify-phases %standard-phases
(add-before 'check 'set-HOME
(lambda _
(setenv "HOME" "/tmp"))))))
(inputs (list python-dendropy python-matplotlib python-numpy python-pysam
python-scipy))
(native-inputs (list python-setuptools python-wheel))
(home-page "https://ecogenomics.github.io/CheckM/")
(synopsis "Assess the quality of putative genome bins")
(description