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Author SHA1 Message Date
Ricardo Wurmus
a2958d750b
gnu: r-curatedtcgadata: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-curatedtcgadata): Update to 1.30.0.

Change-Id: Ia427cb0b63ba1089d717e7efdb73ff8826bcf07d
2025-05-12 08:55:10 +02:00
Ricardo Wurmus
ef204b63e1
gnu: r-gagedata: Update to 2.46.0.
* gnu/packages/bioconductor.scm (r-gagedata): Update to 2.46.0.

Change-Id: I5fc2489891207fbb249651d0b56eff7c75274cca
2025-05-12 08:55:10 +02:00
Ricardo Wurmus
7bcd5c266b
gnu: r-prolocdata: Update to 1.46.0.
* gnu/packages/bioconductor.scm (r-prolocdata): Update to 1.46.0.

Change-Id: I87cd79a11f9a1de302b7c3b7314918964a0c0143
2025-05-12 08:55:10 +02:00
Ricardo Wurmus
280a808407
gnu: r-minionsummarydata: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-minionsummarydata): Update to 1.38.0.

Change-Id: I978ac23b9ae0c69873d569d64cbce2a40b9b919e
2025-05-12 08:55:09 +02:00
Ricardo Wurmus
b4036c29e3
gnu: r-minfidataepic: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-minfidataepic): Update to 1.34.0.

Change-Id: I5eac84d1db0b985140ff85bd580379405f1af78d
2025-05-12 08:55:09 +02:00
Ricardo Wurmus
2b72597f1d
gnu: r-mousegastrulationdata: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-mousegastrulationdata): Update to 1.22.0.

Change-Id: I716e7325f77c65cc61f0914ef5ac5bb98e9f6410
2025-05-12 08:55:09 +02:00
Ricardo Wurmus
eb298a4517
gnu: r-methylclockdata: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-methylclockdata): Update to 1.16.0.

Change-Id: Ie97c9e54f2a60b5132f2fd4f08d60602e0ff23d5
2025-05-12 08:55:09 +02:00
Ricardo Wurmus
c9763f059f
gnu: r-methylaiddata: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-methylaiddata): Update to 1.40.0.

Change-Id: I27fe623dde66a088b9567a6c459c03d6c4d822ca
2025-05-12 08:55:09 +02:00
Ricardo Wurmus
7b52d2c776
gnu: r-macrophage: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-macrophage): Update to 1.24.0.

Change-Id: I9f7cd0b50543930a4c06f5f0d0067af1d6c82483
2025-05-12 08:55:09 +02:00
Ricardo Wurmus
d6d559c4ab
gnu: r-golubesets: Update to 1.50.0.
* gnu/packages/bioconductor.scm (r-golubesets): Update to 1.50.0.

Change-Id: I84daae58a4d84b578f0881cd5a7346966530de99
2025-05-12 08:55:09 +02:00
Ricardo Wurmus
9046e17e02
gnu: r-genelendatabase: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-genelendatabase): Update to 1.44.0.

Change-Id: I834018e74e1ef8ca5c21003a1eb30bbe9c9997d8
2025-05-12 08:55:09 +02:00
Ricardo Wurmus
30bec76b00
gnu: r-derfinderdata: Update to 2.26.0.
* gnu/packages/bioconductor.scm (r-derfinderdata): Update to 2.26.0.

Change-Id: I9db140c44040670c4c2e44a8aaef2b65c24e2831
2025-05-12 08:55:09 +02:00
Ricardo Wurmus
7bc427ff5d
gnu: r-chromstardata: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-chromstardata): Update to 1.34.0.

Change-Id: I77f041f59bef6f1746a2898f92f874b65eed6f22
2025-05-12 08:55:08 +02:00
Ricardo Wurmus
d32ed19654
gnu: r-celldex: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-celldex): Update to 1.18.0.

Change-Id: I26e32649ebdf8400cf6157b90a548db3b8040ad9
2025-05-12 08:55:08 +02:00
Ricardo Wurmus
aa3d171fee
gnu: r-breastcancervdx: Update to 1.46.0.
* gnu/packages/bioconductor.scm (r-breastcancervdx): Update to 1.46.0.

Change-Id: I5c9913b28bd9bd7742c45f253b045855342fe443
2025-05-12 08:55:08 +02:00
Ricardo Wurmus
a959047757
gnu: r-bodymaprat: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-bodymaprat): Update to 1.24.0.

Change-Id: I8ffbff5971e28cbe660c3722ccac85a981e1d789
2025-05-12 08:55:08 +02:00
Ricardo Wurmus
9ddfef3a4a
gnu: r-bcellviper: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-bcellviper): Update to 1.44.0.

Change-Id: I916361d424274ddddfcb4b41b7df232278293e97
2025-05-12 08:55:08 +02:00
Ricardo Wurmus
45244ba92e
gnu: r-airway: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-airway): Update to 1.28.0.

Change-Id: Ieb1826ed0355850310f2afb6e50ff7c320d1d19d
2025-05-12 08:55:08 +02:00
Ricardo Wurmus
3ca5b6b7c4
gnu: r-adductdata: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-adductdata): Update to 1.24.0.

Change-Id: I470854bac0f9a3f5080f591ad79a934e0b571cda
2025-05-12 08:55:08 +02:00
Ricardo Wurmus
667a7fcd75
gnu: r-phyloseq: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-phyloseq): Update to 1.52.0.

Change-Id: Ic5ef1e540aeedcedc25ca3aec6eaec0d7a72a7cb
2025-05-12 08:55:08 +02:00
Ricardo Wurmus
409b2d0bb1
gnu: r-tximeta: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.26.0.
[native-inputs]: Add r-edger and r-org-dm-eg-db.

Change-Id: I2cc72379c43598ee838cddc06fda7a4930007b76
2025-05-12 08:55:08 +02:00
Ricardo Wurmus
b6d5e929a9
gnu: r-tricycle: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-tricycle): Update to 1.16.0.

Change-Id: I1c56fa881495a11f84eec0b1fe0b968c8cb29e50
2025-05-12 08:55:07 +02:00
Ricardo Wurmus
1377add8f8
gnu: r-tcgabiolinks: Update to 2.36.0.
* gnu/packages/bioconductor.scm (r-tcgabiolinks): Update to 2.36.0.

Change-Id: I9569c4178e12c45a1b07e2baed3137de3be531ce
2025-05-12 08:55:07 +02:00
Ricardo Wurmus
06d3f0a265
gnu: r-biscuiteer: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-biscuiteer): Update to 1.22.0.

Change-Id: I74e038980d8e1ca20e12ad56341e18b3579f7372
2025-05-12 08:55:07 +02:00
Ricardo Wurmus
7e1bebca15
gnu: r-omicade4: Update to 1.48.0.
* gnu/packages/bioconductor.scm (r-omicade4): Update to 1.48.0.

Change-Id: I5b38a7ad1fc480c1accdb0b155f6fed989a0d648
2025-05-12 08:55:07 +02:00
Ricardo Wurmus
c77aff235c
gnu: r-dmrseq: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-dmrseq): Update to 1.28.0.

Change-Id: I6692b4e87fd6169e9c10a261a718d4fb0df06fec
2025-05-12 08:55:07 +02:00
Ricardo Wurmus
6f3e73c5e8
gnu: r-dada2: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-dada2): Update to 1.36.0.

Change-Id: I16732f2da9af2382fd3f557d005792616685a92e
2025-05-12 08:55:07 +02:00
Ricardo Wurmus
f26f01e9fd
gnu: r-bsseq: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-bsseq): Update to 1.44.0.
[propagated-inputs]: Add r-assorthead.
[native-inputs]: Add r-doparallel and r-matrix.

Change-Id: I94a78e4883893ac72d538be11fd480d8d33d20ed
2025-05-12 08:55:07 +02:00
Ricardo Wurmus
f1e1492ae8
gnu: r-biotmle: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-biotmle): Update to 1.32.0.
[native-inputs]: Add r-superlearner.

Change-Id: Ie97429835fd74ab0f721315be74cfe22794c2ae9
2025-05-12 08:55:07 +02:00
Ricardo Wurmus
51bd87234a
gnu: r-biotip: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-biotip): Update to 1.22.0.

Change-Id: Id60b2575a1be93eb5a079fed319f04d5300a3c95
2025-05-12 08:55:06 +02:00
Ricardo Wurmus
68505b3f0e
gnu: r-bioqc: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-bioqc): Update to 1.36.0.

Change-Id: Ifa044f66a99e146c89c78fe20a92ed277b9f58b6
2025-05-12 08:55:06 +02:00
Ricardo Wurmus
85e3a70aef
gnu: r-bionet: Update to 1.68.0.
* gnu/packages/bioconductor.scm (r-bionet): Update to 1.68.0.

Change-Id: I9d409cbb81002267a513d58298f3ebd7d6c1807b
2025-05-12 08:55:06 +02:00
Ricardo Wurmus
a8d520a9db
gnu: r-bionero: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-bionero): Update to 1.16.0.

Change-Id: Iaed12053adbf1242824bdbb782f16cf1273562eb
2025-05-12 08:55:06 +02:00
Ricardo Wurmus
2d296d1601
gnu: r-biomvrcns: Update to 1.48.0.
* gnu/packages/bioconductor.scm (r-biomvrcns): Update to 1.48.0.

Change-Id: Id5f3919ac7c6b30c1fb3efa2eb4c73cc681b64bd
2025-05-12 08:55:06 +02:00
Ricardo Wurmus
44b8f22952
gnu: r-biomvcclass: Update to 1.76.0.
* gnu/packages/bioconductor.scm (r-biomvcclass): Update to 1.76.0.

Change-Id: Icdd652bef1cc0ea5155d9d4ab6266bb180aa44c5
2025-05-12 08:55:06 +02:00
Ricardo Wurmus
f2ce51d3ee
gnu: r-mvcclass: Update to 1.82.0.
* gnu/packages/bioconductor.scm (r-mvcclass): Update to 1.82.0.

Change-Id: If609f852dff0ba941f7d0f011cba300d8460adfc
2025-05-12 08:55:06 +02:00
Ricardo Wurmus
d3002ff092
gnu: r-biomformat: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-biomformat): Update to 1.36.0.

Change-Id: Iaef9c6011c70dbc60824cd516d3685db2d5d9cc3
2025-05-12 08:55:06 +02:00
Ricardo Wurmus
c80a011a37
gnu: r-biodb: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-biodb): Update to 1.16.0.
[native-inputs]: Remove r-testthat.

Change-Id: If9e15d02a34efe3fa0ae4e3e7061c36011e28003
2025-05-12 08:55:06 +02:00
Ricardo Wurmus
2b3b9b5633
gnu: r-biocthis: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-biocthis): Update to 1.18.0.

Change-Id: I2cbb6bd3c70a859ae340c6ea773c287df47b67c9
2025-05-12 08:55:06 +02:00
Ricardo Wurmus
4fa000ce59
gnu: r-bcrank: Update to 1.70.0.
* gnu/packages/bioconductor.scm (r-bcrank): Update to 1.70.0.

Change-Id: Ia0745ad7967108fbcd551f87c5e4f0062b1f1df9
2025-05-12 08:55:05 +02:00
Ricardo Wurmus
c606f5ce33
gnu: r-bbcanalyzer: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-bbcanalyzer): Update to 1.38.0.

Change-Id: I5da7277082541aa00edfe5c16ab15f3b2ebb7a2f
2025-05-12 08:55:05 +02:00
Ricardo Wurmus
fe73224f84
gnu: r-baynorm: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-baynorm): Update to 1.26.0.

Change-Id: I33a7d1e0280d52b9724dcf9bc85294fa8c66d4a2
2025-05-12 08:55:05 +02:00
Ricardo Wurmus
f1339b4274
gnu: r-bayesspace: Update to 1.17.0.
* gnu/packages/bioconductor.scm (r-bayesspace): Update to 1.17.0.

Change-Id: I4f170f85b9bbb2ff24d47e6f7c87b1428df5cb9d
2025-05-12 08:55:05 +02:00
Ricardo Wurmus
5f85c18e5b
gnu: r-bayesknockdown: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-bayesknockdown): Update to 1.34.0.

Change-Id: I69faad00a359c1fff392e2cffc57db64f8fc1d93
2025-05-12 08:55:05 +02:00
Ricardo Wurmus
27306fb9d8
gnu: r-basicstarrseq: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-basicstarrseq): Update to 1.36.0.

Change-Id: I085c47606a7fdf99acba63c173bfc0f740b9215a
2025-05-12 08:55:05 +02:00
Ricardo Wurmus
7350df0f7b
gnu: r-basics: Update to 2.20.0.
* gnu/packages/bioconductor.scm (r-basics): Update to 2.20.0.

Change-Id: I7e1b0d75535bcba050ee23a5e72e0d03a769274d
2025-05-12 08:55:05 +02:00
Ricardo Wurmus
4a952cad4d
gnu: r-basic4cseq: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-basic4cseq): Update to 1.44.0.

Change-Id: I786e49a838cc9afc924e3be658de146173372196
2025-05-12 08:55:05 +02:00
Ricardo Wurmus
6f1a39be2d
gnu: r-genetclassifier: Update to 1.48.0.
* gnu/packages/bioconductor.scm (r-genetclassifier): Update to 1.48.0.
[native-inputs]: Add r-biocgenerics.

Change-Id: Ia528e85b940ebcb45a54fd24e5ba20e459294d23
2025-05-12 08:55:05 +02:00
Ricardo Wurmus
819b044569
gnu: r-minet: Update to 3.66.0.
* gnu/packages/bioconductor.scm (r-minet): Update to 3.66.0.

Change-Id: Ie8ce9c81d66fb7db79e6b6c15e4d4506196e3159
2025-05-12 08:55:04 +02:00
Ricardo Wurmus
cf0d6f5920
gnu: r-biobtreer: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-biobtreer): Update to 1.20.0.
[native-inputs]: Remove r-testthat.

Change-Id: I1b7708d784e836531bba093d44f531960c259207
2025-05-12 08:55:04 +02:00