Ricardo Wurmus
f3112de0bf
gnu: r-spatstat-random: Update to 3.4-1.
...
* gnu/packages/cran.scm (r-spatstat-random): Update to 3.4-1.
Change-Id: I0916a0084cca6ddac056351f4e5248139824119f
2025-05-22 08:13:15 +02:00
Ricardo Wurmus
cbe8c5be2b
gnu: r-spatstat-geom: Update to 3.4-1.
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* gnu/packages/cran.scm (r-spatstat-geom): Update to 3.4-1.
Change-Id: Id1e61c0ba3dc76520b9038055856c13ac131192b
2025-05-22 08:13:15 +02:00
Ricardo Wurmus
17f96012c2
gnu: r-spatstat-explore: Update to 3.4-3.
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* gnu/packages/cran.scm (r-spatstat-explore): Update to 3.4-3.
Change-Id: Ic8321a1dcd99826ab6579173270849f4e9a4dfc9
2025-05-22 08:13:15 +02:00
Ricardo Wurmus
9983228bd5
gnu: r-directlabels: Update to 2025.5.20.
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* gnu/packages/cran.scm (r-directlabels): Update to 2025.5.20.
[native-inputs]: Add r-nlme.
Change-Id: I4d847a84e1691ec2df1140c2d194111f07116759
2025-05-22 08:13:15 +02:00
Ricardo Wurmus
0f6c495755
gnu: r-openmx: Update to 2.22.6.
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* gnu/packages/cran.scm (r-openmx): Update to 2.22.6.
[native-inputs]: Add r-mvtnorm.
Change-Id: If7414b663055844e11516a664e4c4f9e470cd0a7
2025-05-22 08:13:15 +02:00
Ricardo Wurmus
4cb1369a4c
gnu: r-quanteda: Update to 4.3.0.
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* gnu/packages/cran.scm (r-quanteda): Update to 4.3.0.
Change-Id: I09ba491a371708499b9c73bdfc5474ca85aa3ed7
2025-05-22 08:13:15 +02:00
Ricardo Wurmus
0fae8ee14a
gnu: r-isocodes: Update to 2025.05.18.
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* gnu/packages/cran.scm (r-isocodes): Update to 2025.05.18.
Change-Id: I5beab5d033c6bec4c536f408dbd1c3275d13a4d8
2025-05-22 08:13:15 +02:00
Ricardo Wurmus
abf960c7d5
gnu: r-acss: Update to 0.3-2.
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* gnu/packages/cran.scm (r-acss): Update to 0.3-2.
[native-inputs]: Add r-knitr.
Change-Id: Ia06bd5f5fbf3a4a39d5519d8d5df19c1cb5ae875
2025-05-22 08:13:14 +02:00
Ricardo Wurmus
f722e4f313
gnu: r-acss-data: Update to 1.2.
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* gnu/packages/cran.scm (r-acss-data): Update to 1.2.
Change-Id: I60afb975b9b65fb6ebb4577f82bc6a20b2313c7a
2025-05-22 08:13:14 +02:00
Ricardo Wurmus
074ce5cf1b
gnu: r-bayestestr: Update to 0.16.0.
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* gnu/packages/cran.scm (r-bayestestr): Update to 0.16.0.
Change-Id: Ic4b11613dc994318d8bafdea1e1c6342c27ce9a8
2025-05-22 08:13:14 +02:00
Ricardo Wurmus
05942887f7
gnu: r-flextable: Update to 0.9.8.
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* gnu/packages/cran.scm (r-flextable): Update to 0.9.8.
Change-Id: I41e8da08de7e1cf0968c19d4dba39b7562f50269
2025-05-22 08:13:14 +02:00
Ricardo Wurmus
47e29505d8
gnu: r-insight: Update to 1.3.0.
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* gnu/packages/cran.scm (r-insight): Update to 1.3.0.
Change-Id: Ifdc6a668124755921fe6a4a354482269f0153dc0
2025-05-22 08:13:14 +02:00
Ricardo Wurmus
ce09b79a04
gnu: r-cubature: Update to 2.1.3.
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* gnu/packages/cran.scm (r-cubature): Update to 2.1.3.
Change-Id: I69abb184eae6ecfab27d697a19a48845ed316e76
2025-05-22 08:13:14 +02:00
Ricardo Wurmus
e548fe3d05
gnu: r-nanonext: Update to 1.6.0.
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* gnu/packages/cran.scm (r-nanonext): Update to 1.6.0.
Change-Id: Iff6e26ab28a94ed415f23e9611e7df8394367ef6
2025-05-22 08:13:14 +02:00
Ricardo Wurmus
500fc0b838
gnu: r-recipes: Update to 1.3.1.
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* gnu/packages/cran.scm (r-recipes): Update to 1.3.1.
Change-Id: I60f0df7bcf22c77b81883e1d2ae8525853e32285
2025-05-22 08:13:14 +02:00
Ricardo Wurmus
2c46336cc5
gnu: r-kknn: Update to 1.4.1.
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* gnu/packages/cran.scm (r-kknn): Update to 1.4.1.
Change-Id: I38b0858da47a13eb6d6560c5f37b45fc1ef7aa38
2025-05-22 08:13:14 +02:00
Ricardo Wurmus
1b6d716171
gnu: r-mapproj: Update to 1.2.12.
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* gnu/packages/cran.scm (r-mapproj): Update to 1.2.12.
Change-Id: I9bb4b6110cb33c09359166ba2d6b58be0c20b77a
2025-05-22 08:13:13 +02:00
Ricardo Wurmus
b35e8444d6
gnu: r-marginaleffects: Update to 0.26.0.
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* gnu/packages/cran.scm (r-marginaleffects): Update to 0.26.0.
Change-Id: I6d6de80c638b934d2653c7aa758aa9d37b6e74cd
2025-05-22 08:13:13 +02:00
Ricardo Wurmus
98409aac80
gnu: r-cftime: Update to 1.6.2.
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* gnu/packages/cran.scm (r-cftime): Update to 1.6.2.
Change-Id: I9073641f697d0b277768e81fc1fb2fa1562cb77c
2025-05-22 08:13:13 +02:00
jgart
471fc515c8
gnu: trealla: Update to 2.71.28.
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* gnu/packages/prolog.scm (trealla): Update to 2.71.28.
Change-Id: I14f6469c2bd37a5fce2cefe7599ac2e5e5e23924
2025-05-21 15:14:32 -05:00
Artyom V. Poptsov
1b2ac3f27d
gnu: dropwatch: Update to 1.5.5.
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* gnu/packages/networking.scm (dropwatch): Update to 1.5.5.
[source]<url>: Remove ".git" suffix from the URI.
Change-Id: Ic3703ce98148ddf6d6fcd7b44dbf50de727ab8b5
2025-05-21 20:57:21 +03:00
Artyom V. Poptsov
3f58a6f5eb
gnu: frrouting: Update to 10.3.
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* gnu/packages/networking.scm (frrouting): Update to 10.3.
Change-Id: I0f4bacc454f430be8791da80626fae269396f8c1
2025-05-21 20:54:56 +03:00
Artyom V. Poptsov
58325c380d
gnu: vnstat: Update to 2.13.
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* gnu/packages/networking.scm (vnstat): Update to 2.13.
Change-Id: Ib27db9b1f98db1bba51d4de154b286e98a541e02
2025-05-21 20:51:20 +03:00
Navid Afkhami
d3d157bc61
gnu: Add python-torchdiffeq.
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* gnu/packages/machine-learning.scm (python-torchdiffeq): New variable.
Change-Id: Ic2ab73250b60f1733d2721ebd6d3abae719c5a1f
2025-05-21 17:15:58 +02:00
Ricardo Wurmus
646fef769d
gnu: r-tximeta: Update to 1.26.1.
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* gnu/packages/bioconductor.scm (r-tximeta): Update to 1.26.1.
Change-Id: I19ae8a59fd8f58facc9302a15348d9649607fb88
2025-05-21 15:21:24 +02:00
Ricardo Wurmus
eb9877c6aa
gnu: r-biocpkgtools: Update to 1.26.2.
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* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.26.2.
Change-Id: I4efe3710c67f69d8a3b611d20d4e7a7f1b1d0788
2025-05-21 15:21:24 +02:00
Ricardo Wurmus
8e03e9b424
gnu: r-scrapper: Update to 1.2.1.
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* gnu/packages/bioconductor.scm (r-scrapper): Update to 1.2.1.
Change-Id: I94f117b6544bac4ac65cd8107841f838efb7c7e3
2025-05-21 15:21:24 +02:00
Ricardo Wurmus
7fe4561c8e
gnu: r-msnbase: Update to 2.34.1.
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* gnu/packages/bioconductor.scm (r-msnbase): Update to 2.34.1.
Change-Id: I18d4762867bfc287601e56789215bb91b5bf0d5f
2025-05-21 15:21:24 +02:00
Ricardo Wurmus
d504ec95ef
gnu: r-metabocoreutils: Update to 1.16.1.
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* gnu/packages/bioconductor.scm (r-metabocoreutils): Update to 1.16.1.
Change-Id: I8508fa80073cb950cdecd6b2394cb74740c004e0
2025-05-21 15:21:24 +02:00
Ricardo Wurmus
d307bd16c3
gnu: r-biocmake: Update to 1.0.1.
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* gnu/packages/bioconductor.scm (r-biocmake): Update to 1.0.1.
Change-Id: I7144aec43cb3749f659d4ff8325e947193038d62
2025-05-21 15:21:24 +02:00
Ricardo Wurmus
a16247066f
gnu: Add cable.
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* gnu/packages/audio.scm (cable): New variable.
Change-Id: Ia6d5191eac4aab281d714c025b949c49043ddcf5
2025-05-21 15:21:24 +02:00
Ricardo Wurmus
b430cb1c78
gnu: r-anpan: Update to 0.3.0-1.efd4dc4.
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* gnu/packages/bioinformatics.scm (r-anpan): Update to 0.3.0-1.efd4dc4.
[properties]: Record updater-extra-native-inputs.
[propagated-inputs]: Add r-cli; remove r-mass.
Change-Id: I60ea7dae8974df81b0188164568de2fe930d1fc4
2025-05-21 15:21:23 +02:00
Ricardo Wurmus
2df2d98fe8
gnu: r-dygraphs: Use minify build system.
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* gnu/packages/cran.scm (r-dygraphs)[arguments]: Reuse minify-build-system
phase.
[native-inputs]: Replace node-uglify-js with esbuild.
Change-Id: If031d3faa25673ee849ca89f1db911aed7cb8b9a
2025-05-21 15:21:23 +02:00
Ricardo Wurmus
19c184f37c
gnu: Add python-jack-client.
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* gnu/packages/audio.scm (python-jack-client): New variable.
Change-Id: I7ce11a7b00e2c5f56ea68324737b288a7193554e
2025-05-21 15:21:23 +02:00
Sergey Trofimov
11bc17c409
home: services: Build "files" union allowing dangling symlinks.
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* gnu/home/services.scm (files->files-directory): Build file union
without checking for existence of included items.
* tests/guix-home.sh: Verify symlinking files out of store works.
Change-Id: I94054003f4a6be944252ce7a397cf56f0b979554
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2025-05-21 08:05:27 +09:00
Sergey Trofimov
b989e503ac
gexp: Add symlink-to procedure.
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* guix/gexp.scm (symlink-to): New procedure.
* doc/guix.texi (G-Expressions): Document it.
Change-Id: I7c1ba3a29a4e5350cb4f196185b7171c4750b6b8
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2025-05-21 08:05:27 +09:00
Sergey Trofimov
9b7213fc11
gexp: Allow file-unions with dangling symlinks.
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* guix/gexp.scm (file-union): Add #:dangling-symlinks? parameter.
Change-Id: I09d44ec785fd7141b02dee2d8dc23ccc499aa933
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2025-05-21 08:05:27 +09:00
Divya Ranjan
93e74686ea
gnu: mupdf: Update to 1.26.0.
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* gnu/packages/pdf.scm (mupdf): Update to 1.26.0.
[arguments] <#:make-flags>: Remove USE_SYSTEM_BROTLI=no.
[inputs]: Add brotli.
Change-Id: I2c09e4c1aded109dbec810be9a40b5916c365743
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2025-05-21 08:05:27 +09:00
Maxim Cournoyer
9a186090df
gnu: Remove mupdf-1.24.
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* gnu/packages/pdf.scm (mupdf-1.24): Delete variable.
Change-Id: Ic6d607253cf704a9dd09b517b0916a9b433b1be9
2025-05-21 08:05:27 +09:00
Maxim Cournoyer
21aa23d514
gnu: sioyek: Build with current mupdf.
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* gnu/packages/pdf.scm (sioyek) [inputs]: Replace mupdf-1.24 with mupdf.
Change-Id: I6fbc18f61db8efdc7fbd1f3d1561f84480cb9104
2025-05-21 08:05:27 +09:00
Sergey Trofimov
7ece7095e9
gnu: elogind: Adjust patch for pkttyagent.
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* gnu/packages/freedesktop.scm (elogind/fixed): New variable.
(elogind): Replace with elogind/fixed.
Change-Id: I9c474291816aee7464db5cbe9398b589479e79cf
Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Modified-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2025-05-21 08:05:27 +09:00
Danny Milosavljevic
28b2b7e6d7
Revert "gnu: rust-gix-path: Update to 0.10.18."
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This reverts commit 2837dee1f2
2025-05-20 18:40:08 +02:00
Danny Milosavljevic
023b815b62
Revert "gnu: rust-gix-trace: Update to 0.1.12."
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This reverts commit f2303dac31
2025-05-20 18:40:08 +02:00
Danny Milosavljevic
cbef21fd6d
Revert "gnu: rust-gix-sec: Update to 0.10.12."
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This reverts commit 33b4ed0eb7
2025-05-20 18:40:08 +02:00
Danny Milosavljevic
696da370b0
Revert "gnu: rust-gix-utils: Update to 0.1.14."
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This reverts commit eb7edfb476
2025-05-20 18:40:08 +02:00
Danny Milosavljevic
26adecbebc
Revert "gnu: rust-gix-validate: Update to 0.9.4."
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This reverts commit 38db96c0fe
2025-05-20 18:40:08 +02:00
jgart
b51bb28993
gnu: trealla: Update to 2.71.24.
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* gnu/packages/prolog.scm (trealla): Update to 2.71.24.
Change-Id: I2cd133c08f9ff4a54b11db3b3d098096ce4d2872
2025-05-20 10:05:24 -05:00
Danny Milosavljevic
93c947ea28
Revert "gnu: rust-cargo-lock: Update to 10.1.0."
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This reverts commit ec735a825a
2025-05-20 14:40:27 +02:00
Danny Milosavljevic
aff76fa505
Revert "gnu: rust-bstr: Update to 1.12.0."
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This reverts commit 72499e95ea
2025-05-20 14:40:25 +02:00
Danny Milosavljevic
191419214e
Revert "gnu: rust-once-cell: Update to 1.21.3."
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This reverts commit 9f0ee362dc
2025-05-20 14:40:22 +02:00
