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Author SHA1 Message Date
Ricardo Wurmus
88b824191e
gnu: r-antiprofiles: Update to 1.48.0.
* gnu/packages/bioconductor.scm (r-antiprofiles): Update to 1.48.0.

Change-Id: Icd16775bf57c2ec783b4e72a08138c966da48962
2025-05-12 08:54:20 +02:00
Ricardo Wurmus
5d52abfed6
gnu: r-aneufinder: Update to 1.35.0.
* gnu/packages/bioconductor.scm (r-aneufinder): Update to 1.35.0.
[native-inputs]: Add r-bsgenome-hsapiens-ucsc-hg19.

Change-Id: I0b41b8e97829a5a27f8bee98317db8be6cc526e7
2025-05-12 08:54:20 +02:00
Ricardo Wurmus
2f3560bbfc
gnu: r-altcdfenvs: Update to 2.70.0.
* gnu/packages/bioconductor.scm (r-altcdfenvs): Update to 2.70.0.

Change-Id: Ie84347eefe5046d0ec1d87257a84712c3fe7e44d
2025-05-12 08:54:19 +02:00
Ricardo Wurmus
0fbc5346f8
gnu: r-alphabeta: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-alphabeta): Update to 1.22.0.

Change-Id: I8b4108e5f7a6897b0e738317e9ea023e0ea54f22
2025-05-12 08:54:19 +02:00
Ricardo Wurmus
e6b3a92d10
gnu: r-alevinqc: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-alevinqc): Update to 1.24.0.
[properties]: Remove updater-extra-native-inputs.

Change-Id: Iaced4c394b86972a7e73686437df635da037dea5
2025-05-12 08:54:19 +02:00
Ricardo Wurmus
2a2eefd95b
gnu: r-aldex2: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-aldex2): Update to 1.40.0.

Change-Id: Iac30b14e7f9e920f2e84a9dd79e894c0fd1026ce
2025-05-12 08:54:19 +02:00
Ricardo Wurmus
04878d2cf5
gnu: r-anvilgcp: Update to 1.2.0.
* gnu/packages/bioconductor.scm (r-anvilgcp): Update to 1.2.0.

Change-Id: I89f623a55cdf5c72aed3f8d76b8302a4b36f1960
2025-05-12 08:54:19 +02:00
Ricardo Wurmus
5a08ce4df0
gnu: r-anvilbase: Update to 1.2.0.
* gnu/packages/bioconductor.scm (r-anvilbase): Update to 1.2.0.

Change-Id: I90b4551caa8cd68626198869cbee05ee95e537ad
2025-05-12 08:54:19 +02:00
Ricardo Wurmus
d0a04764d9
gnu: r-annotationhubdata: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-annotationhubdata): Update to 1.38.0.

Change-Id: Ica7cb350b027318c3fe55ed21c1e530327fbd991
2025-05-12 08:54:19 +02:00
Ricardo Wurmus
f8fe988db9
gnu: r-animalcules: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-animalcules): Update to 1.24.0.

Change-Id: If6fc4b4d831a2832215cf5d24dde1e7da906125f
2025-05-12 08:54:19 +02:00
Ricardo Wurmus
7eec7b4f4c
gnu: r-ancombc: Update to 2.10.0.
* gnu/packages/bioconductor.scm (r-ancombc): Update to 2.10.0.

Change-Id: I501a00e3edc050bded31973d0c2a1a7796e4170d
2025-05-12 08:54:19 +02:00
Ricardo Wurmus
be8b2a5df9
gnu: r-anaquin: Update to 2.32.0.
* gnu/packages/bioconductor.scm (r-anaquin): Update to 2.32.0.

Change-Id: Icc41e23e97d590b359bb30cac5739ab5ec0bff21
2025-05-12 08:54:18 +02:00
Ricardo Wurmus
f0f6c7eac4
gnu: r-amaretto: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-amaretto): Update to 1.24.0.

Change-Id: I475839af8f2337663bc39d8c1e6709b56806fd30
2025-05-12 08:54:18 +02:00
Ricardo Wurmus
e84d384b69
gnu: r-amplican: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-amplican): Update to 1.30.0.
[native-inputs]: Add r-devtools.

Change-Id: I52a340216ca0cea94e8e2d50ed0c34e1397399e6
2025-05-12 08:54:18 +02:00
Ricardo Wurmus
b3d96d305c
gnu: r-amountain: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-amountain): Update to 1.34.0.

Change-Id: I1d35f988f6901b783287fa3645b5c6cfc81f3f03
2025-05-12 08:54:18 +02:00
Ricardo Wurmus
84ab6c7deb
gnu: r-airpart: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-airpart): Update to 1.16.0.

Change-Id: I628b3ac172bbdb497d2e59f1901e2d90857c7a31
2025-05-12 08:54:18 +02:00
Ricardo Wurmus
3a7ddacde8
gnu: r-aims: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-aims): Update to 1.40.0.
[native-inputs]: Add r-biocgenerics.

Change-Id: I22a367ac788564851fdaf35d031403c5e3410882
2025-05-12 08:54:18 +02:00
Ricardo Wurmus
3f0d0f744d
gnu: r-agimicrorna: Update to 2.58.0.
* gnu/packages/bioconductor.scm (r-agimicrorna): Update to 2.58.0.

Change-Id: Ic8aa960b3d6468a34d8170b8cfd90c0b8176ab14
2025-05-12 08:54:18 +02:00
Ricardo Wurmus
6a2aaa3325
gnu: r-adductomicsr: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-adductomicsr): Update to 1.24.0.

Change-Id: I1d43f2db5a3c05f04de95e02cad94016694ead0d
2025-05-12 08:54:18 +02:00
Ricardo Wurmus
c95458bfc4
gnu: r-agilp: Update to 3.40.0.
* gnu/packages/bioconductor.scm (r-agilp): Update to 3.40.0.

Change-Id: I69282cc34f8b0fe0255f22b243e3748aa41f0b7a
2025-05-12 08:54:18 +02:00
Ricardo Wurmus
3de13ac0f0
gnu: r-aggregatebiovar: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-aggregatebiovar): Update to 1.18.0.

Change-Id: I2ca20b01c20640e8a4be603e19210cc6423fc784
2025-05-12 08:54:17 +02:00
Ricardo Wurmus
6d6c003220
gnu: r-agdex: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-agdex): Update to 1.56.0.

Change-Id: Ic61f70fc91dd0e7c706c901b6494cd695a600fdf
2025-05-12 08:54:17 +02:00
Ricardo Wurmus
0ed7d75df0
gnu: r-affyrnadegradation: Update to 1.54.0.
* gnu/packages/bioconductor.scm (r-affyrnadegradation): Update to 1.54.0.

Change-Id: I65911302a5ffda7e95551f8a48fa9f4196f8b609
2025-05-12 08:54:17 +02:00
Ricardo Wurmus
0232c88926
gnu: r-affylmgui: Update to 1.82.0.
* gnu/packages/bioconductor.scm (r-affylmgui): Update to 1.82.0.

Change-Id: Idd8b20f149ef434f1a8b817c16a0d09e60acc190
2025-05-12 08:54:17 +02:00
Ricardo Wurmus
1eb6254aa8
gnu: r-affyilm: Update to 1.60.0.
* gnu/packages/bioconductor.scm (r-affyilm): Update to 1.60.0.

Change-Id: I935453de3be42ad9bb3cdb4e1b13d0cc8e2cc954
2025-05-12 08:54:17 +02:00
Ricardo Wurmus
37c4cb20df
gnu: r-affixcan: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-affixcan): Update to 1.26.0.

Change-Id: Idc7dba98db54145e0a6a40804307457f1ed5da87
2025-05-12 08:54:17 +02:00
Ricardo Wurmus
3763895c53
gnu: r-adsplit: Update to 1.78.0.
* gnu/packages/bioconductor.scm (r-adsplit): Update to 1.78.0.

Change-Id: I84bfa8bfd1252ed9dd4cd1e443e012c5bfbb2b2a
2025-05-12 08:54:17 +02:00
Ricardo Wurmus
5204cbd080
gnu: r-adimpute: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-adimpute): Update to 1.18.0.

Change-Id: I165d7e8675de8a807ff0e05d1e1f8e7a14ed2888
2025-05-12 08:54:17 +02:00
Ricardo Wurmus
24e54ef574
gnu: r-adam: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-adam): Update to 1.24.0.

Change-Id: Ie8e91599088c3360912b946c20e8d0a030e70ae8
2025-05-12 08:54:17 +02:00
Ricardo Wurmus
6a2abc4a22
gnu: r-adacgh2: Update to 2.48.0.
* gnu/packages/bioconductor.scm (r-adacgh2): Update to 2.48.0.
[propagated-inputs]: Remove r-glad.

Change-Id: Id54bd6c3c41102459d86be76b935af818c9adb46
2025-05-12 08:54:16 +02:00
Ricardo Wurmus
582a050c91
gnu: r-absseq: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-absseq): Update to 1.62.0.

Change-Id: I3cd70eca81329f77341e28c90bee23e1b8842dda
2025-05-12 08:54:16 +02:00
Ricardo Wurmus
8cb800e5f9
gnu: r-abarray: Update to 1.76.0.
* gnu/packages/bioconductor.scm (r-abarray): Update to 1.76.0.

Change-Id: I3307803bf2824bd5906d4e678e5ed8c53ab3ffaf
2025-05-12 08:54:16 +02:00
Ricardo Wurmus
f8508ea49c
gnu: r-zebrafishrnaseq: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-zebrafishrnaseq): Update to 1.28.0.

Change-Id: I876679b771d9f3b355faba59a3b193bcad76a0a4
2025-05-12 08:54:16 +02:00
Ricardo Wurmus
eb7b25ecc0
gnu: r-tximportdata: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-tximportdata): Update to 1.36.0.

Change-Id: Ib27e01fb09cae4ad434d52ef1dede3b9f5a57f05
2025-05-12 08:54:16 +02:00
Ricardo Wurmus
967ba58988
gnu: r-tcgabiolinksgui-data: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-tcgabiolinksgui-data): Update to 1.28.0.

Change-Id: Ia9d8109de8573cf3beda7815bf58f7f8b5b25b94
2025-05-12 08:54:16 +02:00
Ricardo Wurmus
b3b6a0f896
gnu: r-systempiperdata: Update to 2.12.0.
* gnu/packages/bioconductor.scm (r-systempiperdata): Update to 2.12.0.

Change-Id: Iee690f0ee430e48a5527649fa123ef8fc6898292
2025-05-12 08:54:16 +02:00
Ricardo Wurmus
1c3c846429
gnu: r-sesamedata: Update to 1.25.0.
* gnu/packages/bioconductor.scm (r-sesamedata): Update to 1.25.0.

Change-Id: Ib0b988018c940fb7e07d53a5127d7df9ba0a03c3
2025-05-12 08:54:16 +02:00
Ricardo Wurmus
b22d56a892
gnu: r-rtcga-rnaseq: Update to 20151101.37.0.
* gnu/packages/bioconductor.scm (r-rtcga-rnaseq): Update to 20151101.37.0.

Change-Id: Ide12b352ffab0ee1699a248162a65d98e8f06d0f
2025-05-12 08:54:16 +02:00
Ricardo Wurmus
2b79b7e5d6
gnu: r-rnbeads-hg19: Update to 1.39.0.
* gnu/packages/bioconductor.scm (r-rnbeads-hg19): Update to 1.39.0.

Change-Id: I46e72b3f8b0e1a56507b45871de415216671f046
2025-05-12 08:54:15 +02:00
Ricardo Wurmus
86569d9892
gnu: r-rnaseqdata-hnrnpc-bam-chr14: Update to 0.45.0.
* gnu/packages/bioconductor.scm (r-rnaseqdata-hnrnpc-bam-chr14): Update to 0.45.0.

Change-Id: Ieb555559587c0506286b932e14208337a9a51a82
2025-05-12 08:54:15 +02:00
Ricardo Wurmus
6eeec3f23d
gnu: r-rcistarget-hg19-motifdbs-cisbponly-500bp: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-rcistarget-hg19-motifdbs-cisbponly-500bp): Update to 1.28.0.

Change-Id: Ic9d165687c4f25cf5d2cc47d872b10f5e70bc6c3
2025-05-12 08:54:15 +02:00
Ricardo Wurmus
de83057233
gnu: r-parathyroidse: Update to 1.45.1.
* gnu/packages/bioconductor.scm (r-parathyroidse): Update to 1.45.1.

Change-Id: I54a39bf3a783a95a465b4b525becd5a8aef8bcb5
2025-05-12 08:54:15 +02:00
Ricardo Wurmus
883f946b0d
gnu: r-curatedtcgadata: Update to 1.29.2.
* gnu/packages/bioconductor.scm (r-curatedtcgadata): Update to 1.29.2.

Change-Id: I5a5a16c3ad47ac66ee57b2e0e030fae8082309db
2025-05-12 08:54:15 +02:00
Ricardo Wurmus
accfec4f11
gnu: r-gagedata: Update to 2.45.0.
* gnu/packages/bioconductor.scm (r-gagedata): Update to 2.45.0.

Change-Id: I3856f804b56ca1f5ea3f8d6ec80bb999b2134012
2025-05-12 08:54:15 +02:00
Ricardo Wurmus
35ca3c8e32
gnu: r-affydata: Update to 1.56.0.
* gnu/packages/bioconductor.scm (r-affydata): Update to 1.56.0.

Change-Id: Ifaf87f59cdb8f403f0a397e6500b7a8d553bacd7
2025-05-12 08:54:15 +02:00
Ricardo Wurmus
27c41cb213
gnu: r-all: Update to 1.50.0.
* gnu/packages/bioconductor.scm (r-all): Update to 1.50.0.

Change-Id: Ic8d0867cfe0de117c7937b4f2781c4a2124e4049
2025-05-12 08:54:15 +02:00
Ricardo Wurmus
983baddcff
gnu: r-prolocdata: Update to 1.45.1.
* gnu/packages/bioconductor.scm (r-prolocdata): Update to 1.45.1.

Change-Id: I522746eab159a75d321bbb067f8d1eaccc84433c
2025-05-12 08:54:15 +02:00
Ricardo Wurmus
400a13e94e
gnu: r-pasillabamsubset: Update to 0.46.0.
* gnu/packages/bioconductor.scm (r-pasillabamsubset): Update to 0.46.0.

Change-Id: I408feea31d2170aff07d718122a950c478ce7fdb
2025-05-12 08:54:15 +02:00
Ricardo Wurmus
20ab49cfb8
gnu: r-pasilla: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-pasilla): Update to 1.36.0.

Change-Id: Ic01cd35d32e0667863d27a6e724411061608f032
2025-05-12 08:54:14 +02:00
Ricardo Wurmus
444c3941d7
gnu: r-msigdb: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-msigdb): Update to 1.16.0.

Change-Id: I1e3647d5443151bee7831718bed8ee6ed15d6322
2025-05-12 08:54:14 +02:00